correct_field

apply a bias field correction to a MINC volume using a mask

correct_field input.mnc mask.mnc output.mnc

DESCRIPTION

correct_field applies a bias field correction to a MINC volume. It takes an input volume and a mask volume and produces a corrected output volume. The bias field is typically estimated by nu_estimate or spline_smooth as part of the N3 non-parametric non-uniform intensity normalization pipeline. The mask defines the region of the volume over which the correction is applied.

EXAMPLES

correct_field input.mnc brain_mask.mnc output_corrected.mnc

AUTHOR

John G. Sled - McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University.

COPYRIGHTS

Copyright © 1998 by John G. Sled

SEE ALSO

nu_correct, nu_estimate, spline_smooth, evaluate_field