extract_tag_slice
extract tag points lying on a specified slice of a volume
extract_tag_slice volume output.tag x|y|z slice_mm [min] [max]
DESCRIPTION
extract_tag_slice creates a tag file from a volume by extracting only the tag points that lie on the specified slice. The slice is given as a position in millimetres along the chosen axis (x, y, or z). An optional range of label values can be specified to select only tags with labels in that range. If no range is given, all non-zero labels are output.
OPTIONS
This tool uses positional arguments only. There are no named options.
volume- The input MINC volume.
output.tag- The output tag file.
x|y|z- The axis along which to select the slice.
slice_mm- The slice position in millimetres along the chosen axis.
min- Optional minimum label value. Only tags with labels at or above this value are included.
max- Optional maximum label value. Only tags with labels at or below this value are included.
EXAMPLES
Extract tags from the z=10mm slice:
extract_tag_slice volume.mnc output.tag z 10
Extract tags from the x=0mm slice with labels between 3 and 5:
extract_tag_slice volume.mnc output.tag x 0 3 5
AUTHOR
David MacDonald - McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University.
COPYRIGHTS
Copyright © by David MacDonald