find_surface_distances
compute distances from a surface to threshold boundaries in a volume
find_surface_distances volume.mnc surface.obj thresh max_in max_out out.txt
DESCRIPTION
find_surface_distances computes the distance from each vertex of a surface to the nearest threshold boundary in a volume. For each vertex, the search is conducted both inward and outward from the surface, limited by max_in and max_out respectively. The threshold value determines the boundary location. Per-vertex distances are written to the output text file.
OPTIONS
This tool uses positional arguments only. There are no named options.
volume.mnc- The input MINC volume.
surface.obj- The input surface object file.
thresh- The intensity threshold defining the boundary.
max_in- Maximum search distance inward from the surface.
max_out- Maximum search distance outward from the surface.
out.txt- The output text file containing per-vertex distances.
AUTHOR
David MacDonald - McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University.
COPYRIGHTS
Copyright © by David MacDonald