find_volume_centroid

find and print the centroid of a MINC volume

find_volume_centroid input.mnc [threshold]

DESCRIPTION

find_volume_centroid computes and prints the centroid (centre of mass) of a MINC volume. If a threshold is specified, only voxels with values at or above the threshold are included in the centroid calculation. The centroid is printed in world coordinates.

OPTIONS

This tool uses positional arguments only. There are no named options.

input.mnc
The input MINC volume.
threshold
An optional intensity threshold. Only voxels at or above this value contribute to the centroid calculation.

AUTHOR

David MacDonald - McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University.

COPYRIGHTS

Copyright © by David MacDonald

SEE ALSO

volume_cog mincstats